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Structure-specific variation in per- and polyfluoroalkyl substances toxicity among genetically diverse Caenorhabditis elegans strains.

bioRxiv : the preprint server for biology2024-01-01Leuthner TC, Zhang S, Kohrn BF, Stapleton HM et al.PMID:38854041

Extraction Summary

Relations extracted by the NLP pipeline from this paper

45Relations
35Entities
1Specialists

Abstract — Entities Highlighted

Gene/ProteinChemicalDiseasePhenotypeAnatomyDev. Stage
There are >14,500 structurally diverse per- and polyfluoroalkyl substances (PFAS). Despite knowledge that these "forever chemicals" are in 99% of humans, mechanisms of toxicity and adverse health effects are incompletely known. Furthermore, the contribution of genetic variation to PFAS susceptibility and health consequences is unknown. We determined the toxicity of a structurally distinct set of PFAS in twelve genetically diverse strains of the genetic model system Caenorhabditis elegans. Dose-response curves for four perfluoroalkyl carboxylic acids (PFNA, PFOA, PFPeA, and PFBA), two perfluoroalkyl sulfonic acids (PFOS and PFBS), two perfluoroalkyl sulfonamides (PFOSA and PFBSA), two fluoroether carboxylic acids (GenX and PFMOAA), one fluoroether sulfonic acid (PFEESA), and two fluorotelomers (6:2 FCA and 6:2 FTS) were determined in the C. elegans laboratory reference strain, N2, and eleven genetically diverse wild strains. Body length was quantified by image analysis at each dose after 48 hr of developmental exposure of L1 arrest-synchronized larvae to estimate effective concentration values (EC50). There was a significant range in toxicity among PFAS: PFOSA > PFBSA ≈ PFOS ≈ PFNA > PFOA > GenX ≈ PFEESA > PFBS ≈ PFPeA ≈ PFBA. Long-chain PFAS had greater toxicity than short-chain, and fluorosulfonamides were more toxic than carboxylic and sulfonic acids. Genetic variation explained variation in susceptibility to PFBSA, PFOS, PFBA, PFOA, GenX, PFEESA, PFPeA, and PFBA. There was significant variation in toxicity among C. elegans strains due to chain length, functional group, and between legacy and emerging PFAS. C. elegans respond to legacy and emerging PFAS of diverse structures, and this depends on specific structures and genetic variation. Harnessing the natural genetic diversity of C. elegans and the structural complexity of PFAS is a powerful New Approach Methodology (NAM) to investigate structure-activity relationships and mechanisms of toxicity which may inform regulation of other PFAS to improve human and environmental health.

Relation Network

genetic variat...PFBA susceptib...PFOA susceptib...GenX susceptib...PFEESA suscept...PFPeA suscepti...long-chain PFAStoxicityfluorosulfonam...PFASC. elegansPFNAPFOAPFOS susceptib...PFPeAPFBAPFOSPFBSPFOSAPFBSAGenXPFMOAAPFEESA6:2 FCA6:2 FTSbody lengthPFBSA suscepti...C. elegans str...toxicity varia...chain lengthfunctional gro...legacy PFAS

Specialists Used

deepseek: 45

All Extracted Relations (45)

Entity 1RelationEntity 2ConfidenceSpecialistDirection
genetic variationassociated withPFBA susceptibility
85%
deepseeksupports
genetic variationassociated withPFOA susceptibility
85%
deepseeksupports
genetic variationassociated withGenX susceptibility
85%
deepseeksupports
genetic variationassociated withPFEESA susceptibility
85%
deepseeksupports
genetic variationassociated withPFPeA susceptibility
85%
deepseeksupports
long-chain PFASpositively regulatestoxicity
85%
deepseeksupports
fluorosulfonamidespositively regulatestoxicity
85%
deepseeksupports
PFASassociated withC. elegans
85%
deepseeksupports
PFNAassociated withC. elegans
85%
deepseeksupports
PFOAassociated withC. elegans
85%
deepseeksupports
genetic variationassociated withPFOS susceptibility
85%
deepseeksupports
PFPeAassociated withC. elegans
85%
deepseeksupports
PFBAassociated withC. elegans
85%
deepseeksupports
PFOSassociated withC. elegans
85%
deepseeksupports
PFBSassociated withC. elegans
85%
deepseeksupports
PFOSAassociated withC. elegans
85%
deepseeksupports
PFBSAassociated withC. elegans
85%
deepseeksupports
GenXassociated withC. elegans
85%
deepseeksupports
PFMOAAassociated withC. elegans
85%
deepseeksupports
PFEESAassociated withC. elegans
85%
deepseeksupports
6:2 FCAassociated withC. elegans
85%
deepseeksupports
6:2 FTSassociated withC. elegans
85%
deepseeksupports
PFOSAcauses phenotypebody length
85%
deepseeksupports
PFBSAcauses phenotypebody length
85%
deepseeksupports
PFOScauses phenotypebody length
85%
deepseeksupports
PFNAcauses phenotypebody length
85%
deepseeksupports
PFOAcauses phenotypebody length
85%
deepseeksupports
GenXcauses phenotypebody length
85%
deepseeksupports
PFEESAcauses phenotypebody length
85%
deepseeksupports
PFBScauses phenotypebody length
85%
deepseeksupports
PFPeAcauses phenotypebody length
85%
deepseeksupports
PFBAcauses phenotypebody length
85%
deepseeksupports
PFMOAAcauses phenotypebody length
85%
deepseeksupports
6:2 FCAcauses phenotypebody length
85%
deepseeksupports
6:2 FTScauses phenotypebody length
85%
deepseeksupports
genetic variationassociated withPFBSA susceptibility
85%
deepseeksupports
C. elegans strainsassociated withtoxicity variation
85%
deepseeksupports
chain lengthassociated withtoxicity variation
85%
deepseeksupports
functional groupassociated withtoxicity variation
85%
deepseeksupports
legacy PFASassociated withtoxicity variation
85%
deepseeksupports
emerging PFASassociated withtoxicity variation
85%
deepseeksupports
C. elegansassociated withlegacy PFAS
85%
deepseeksupports
C. elegansassociated withemerging PFAS
85%
deepseeksupports
specific structuresassociated withPFAS response
85%
deepseeksupports
genetic variationassociated withPFAS response
85%
deepseeksupports