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Transcriptomics and metabolomics revealed the effects of Polygonatum Rhizoma polysaccharide on delaying C. elegans senescence and ameliorating Alzheimer's disease.

International journal of biological macromolecules2025-01-01Liu Y, Wang Y, Liang Y, Yang S et al.PMID:40925435

Extraction Summary

Relations extracted by the NLP pipeline from this paper

25Relations
27Entities
3Specialists

Abstract — Entities Highlighted

Gene/ProteinChemicalDiseasePhenotypeAnatomyDev. Stage
We explored the role of Polygonatum Rhizoma polysaccharide (PRP) in delaying aging and improving Alzheimer's disease (AD) and revealed its potential molecular mechanism. Through chemical characterizations to clarify the physicochemical properties of PRP, it was found that PRP mainly consists of mannose, glucose, galactose, and arabinose, with molecular weights ranging from 7.4 × 104 to 9.1 × 104 Da; using Caenorhabditis elegans (C. elegans) models, its anti-AD activity was verified by combining approaches using pharmacodynamics, molecular biology, metabolomics, and transcriptomics sequencing. The results of this study showed that PRP significantly extended the lifespan of C. elegans, reduced the accumulations of lipofuscin and increased the ability of C. elegans to resist oxidative stress, and reduced the aggregation of Aβ protein in the AD model C. elegans, and improved neuromuscular dysfunction. Transcriptomic analysis revealed that PRP modulated the expression of genes involved in key processes, including anti-stress and senescence (daf-12, skn-1, gst-4, ctl-1, sod-3, age-1, gcs-1), autophagy (unc-51, bec-1, lgg-1), and mitochondrial function (clk-1, mev-1, isp-1). Metabolomic analysis revealed that PRP improved metabolic disorders in C. elegans by regulating phenylalanine/purine metabolism pathway. These results indicated that PRP exerted its effects through multiple pathways to delay C. elegans aging and improve AD symptoms, providing a strong theoretical basis for the development of AD treatment drugs based on traditional Chinese medicine.

Relation Network

daf-12skn-1Polygonatum Rh...C. elegansgst-4ctl-1sod-3age-1gcs-1unc-51bec-1lgg-1clk-1mev-1isp-1phenylalanine/...Alzheimer's di...senescenceAβ proteinlipofuscinoxidative stre...neuromuscular ...metabolic diso...rial

Specialists Used

deepseek: 22gene_gene: 1gene_expression: 1

All Extracted Relations (25)

Entity 1RelationEntity 2ConfidenceSpecialistDirection
daf-12regulationskn-1
100%
gene_genesupports
Polygonatum Rhizoma polysaccharidetherapeuticC. elegans
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesdaf-12
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesskn-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesgst-4
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesctl-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatessod-3
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesage-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesgcs-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesunc-51
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesbec-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulateslgg-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesclk-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesmev-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesisp-1
85%
deepseeksupports
Polygonatum Rhizoma polysaccharideregulatesphenylalanine/purine metabolism pathway
85%
deepseeksupports
Polygonatum Rhizoma polysaccharidetherapeuticAlzheimer's disease
85%
deepseeksupports
Polygonatum Rhizoma polysaccharidetherapeuticsenescence
85%
deepseeksupports
Polygonatum Rhizoma polysaccharidenegatively regulatesAβ protein
85%
deepseekrefutes
Polygonatum Rhizoma polysaccharidenegatively regulateslipofuscin
85%
deepseekrefutes
Polygonatum Rhizoma polysaccharidenegatively regulatesoxidative stress
85%
deepseekrefutes
Polygonatum Rhizoma polysaccharidetherapeuticneuromuscular dysfunction
85%
deepseeksupports
Polygonatum Rhizoma polysaccharidetherapeuticmetabolic disorders
85%
deepseeksupports
age-1expressed duringrial
83%
gene_expressionsupports
daf-12regulatesskn-1
59%
—supports